MLOC_13443 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.837324.347622.11320
LEAShoots from the seedlings (10 cm shoot stage)27.13184.786889.50380
INF1Young developing inflorescences (5mm)18.638316.670615.80520
INF2Developing inflorescences (1-1.5 cm)20.068726.234820.4420
ROORoots from the seedlings (10 cm shoot stage)17.817612.88628.998670
NODDeveloping tillers at six leaf stage, 3rd internode20.884918.38836.665760
CAR5Developing grain, bracts removed (5 DPA)11.539312.954910.88280
CAR15Developing grain, bracts removed (15 DPA)0.5008830.5331660.286550



CDS Structure of MLOC_13443






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355954
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355954CUST_19592_PI427708080NoneNoneNone
MLOC_13443.1NoneAvailableNonecontig_156566 (Mapped)
MLOC_22928.1NoneAvailableAvailablecontig_1614189 (Mapped)
MLOC_25395.1NoneAvailableNonecontig_1688849 (Mapped)
MLOC_25396.1NoneAvailableNonecontig_1688850 (Not mapped)
MLOC_29016.1NoneAvailableNonecontig_1966754 (Mapped)
MLOC_31643.1NoneAvailableNonecontig_220893 (Not mapped)
MLOC_54775.1NoneAvailableNonecontig_393912 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----