- Predicted Gene MLOC_13441
MLOC_13441 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.629 | 21.5657 | 20.7313 | 18.0887 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.8614 | 19.1865 | 13.603 | 16.1751 |
INF1 | Young developing inflorescences (5mm) | 24.3971 | 25.1492 | 31.1072 | 21.075 |
INF2 | Developing inflorescences (1-1.5 cm) | 44.4926 | 40.2561 | 40.5466 | 44.2653 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.1416 | 20.8328 | 16.0251 | 23.5713 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.4523 | 14.9549 | 16.8766 | 53.8787 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.76964 | 9.19141 | 10.4588 | 9.14605 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.01965 | 3.91645 | 4.49738 | 9.76295 |
CDS Structure of MLOC_13441
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13441.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g11960.1 |
+1 |
0.0 |
671 |
359/516 (70%) |
13111.m01266 protein disease resistance protein RPM1, putative, expressed |
TAIR PP10 |
AT3G07040.1 |
+1 |
9e-53 |
201 |
148/483 (31%) |
| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926 |