- Predicted Gene MLOC_13417
MLOC_13417 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13417_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13417_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 12.5305 | 10.2742 | 10.4029 | 12.2124 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.67767 | 6.15908 | 9.12707 | 8.08099 |
INF1 | Young developing inflorescences (5mm) | 24.8039 | 26.025 | 25.3126 | 23.3528 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.0765 | 25.1534 | 23.0024 | 27.6108 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.42429 | 10.2706 | 7.45109 | 14.0761 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.10627 | 2.12239 | 5.71137 | 9.94345 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.8362 | 14.7892 | 15.0757 | 17.0169 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.3167 | 6.06309 | 4.95155 | 14.9294 |
CDS Structure of MLOC_13417
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13417.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g54110.1 |
+2 |
1e-97 |
318 |
191/242 (79%) |
13102.m06192 protein expressed protein |
TAIR PP10 |
AT2G34357.1 |
+2 |
1e-35 |
140 |
107/253 (42%) |
ARM repeat superfamily protein | chr2:14499236-14505555 FORWARD LENGTH=1280 |