MLOC_1337 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.52224 | 4.06793 | 4.13678 | 3.63146 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.49564 | 1.37965 | 1.70355 | 1.82783 |
| INF1 | Young developing inflorescences (5mm) | 8.17333 | 8.1432 | 8.22213 | 6.23823 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.88158 | 10.5871 | 9.64981 | 9.67397 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.00496 | 3.31775 | 3.25337 | 3.56681 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.82254 | 5.47619 | 4.06173 | 15.91 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.22632 | 6.19918 | 5.89921 | 5.01473 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.46768 | 1.23554 | 1.20197 | 2.75436 |
CDS Structure of MLOC_1337
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1337.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g09470.2 |
-3 |
0.0 |
724 |
441/563 (78%) |
13109.m00814 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT5G05970.1 |
-3 |
1e-95 |
325 |
219/553 (40%) |
| Symbols: NEDD1 | Transducin/WD40 repeat-like superfamily protein | chr5:1795464-1799313 FORWARD LENGTH=781 |
