MLOC_13350 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.070621.516321.986316.1879
LEAShoots from the seedlings (10 cm shoot stage)17.679420.386211.144512.4425
INF1Young developing inflorescences (5mm)10.87988.623529.042877.27717
INF2Developing inflorescences (1-1.5 cm)11.812611.08779.5409910.7395
ROORoots from the seedlings (10 cm shoot stage)10.44614.757313.888214.5168
NODDeveloping tillers at six leaf stage, 3rd internode11.663714.943318.927844.25
CAR5Developing grain, bracts removed (5 DPA)47.677244.465448.003539.5613
CAR15Developing grain, bracts removed (15 DPA)35.846533.559932.71273.6062



CDS Structure of MLOC_13350






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13350.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369506NoneNoneNoneNone
MLOC_13350.1CUST_1287_PI427708080AvailableAvailablecontig_1565425 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g19880.1 +3 0.0 651 335/427 (78%) 13110.m01616 protein alpha-1,2-fucosidase, putative, expressed
TAIR PP10 AT4G34260.1 +3 1e-102 337 196/412 (48%) | Symbols: FUC95A | 1,2-alpha-L-fucosidases | chr4:16398130-16401591 FORWARD LENGTH=843