- Predicted Gene MLOC_13316
MLOC_13316 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13316_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13316_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.14607 | 1.45788 | 1.25717 | 1.36813 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.72221 | 1.39301 | 1.21868 | 1.24506 |
INF1 | Young developing inflorescences (5mm) | 2.76775 | 2.69518 | 2.91478 | 2.34607 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.39734 | 3.40603 | 3.45237 | 3.80001 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.826629 | 1.61118 | 1.5473 | 1.82353 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.227412 | 0.255902 | 0.676175 | 1.10147 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.94087 | 2.43997 | 2.15432 | 2.19482 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.05814 | 0.832644 | 0.622872 | 2.09781 |
CDS Structure of MLOC_13316
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13316.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g40320.1 |
-2 |
1e-124 |
382 |
199/281 (71%) |
13105.m04267 protein PPR repeat domain containing protein, putative, expressed |
TAIR PP10 |
AT1G11900.1 |
-2 |
2e-50 |
182 |
109/282 (39%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4013166-4014630 REVERSE LENGTH=367 |