MLOC_13301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.364861.413531.501221.57194
LEAShoots from the seedlings (10 cm shoot stage)10.101929.022522.350920.0603
INF1Young developing inflorescences (5mm)00.039918300.0512984
INF2Developing inflorescences (1-1.5 cm)0.0371789000.0467266
ROORoots from the seedlings (10 cm shoot stage)9.590736.4975810.66439.66966
NODDeveloping tillers at six leaf stage, 3rd internode1.86912.4199516.118618.5554
CAR5Developing grain, bracts removed (5 DPA)0.1319940.04085620.3987620.2167
CAR15Developing grain, bracts removed (15 DPA)0.8106921.309070.8501662.85514



CDS Structure of MLOC_13301






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13301.1CUST_9061_PI427708080AvailableAvailablecontig_1565321 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38870.1 +2 4e-27 107 53/70 (76%) 13110.m03540 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT1G01490.2 +2 1e-17 80 42/69 (61%) Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177