MLOC_13299 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3180941.136781.171880.788539
LEAShoots from the seedlings (10 cm shoot stage)1.58871.023451.001920.962882
INF1Young developing inflorescences (5mm)2.05392.470692.310771.62981
INF2Developing inflorescences (1-1.5 cm)5.34674.621064.060864.59307
ROORoots from the seedlings (10 cm shoot stage)0.1306370.5524180.5613550.505716
NODDeveloping tillers at six leaf stage, 3rd internode0.3563541.011220.8923432.85663
CAR5Developing grain, bracts removed (5 DPA)2.262392.213722.504071.92872
CAR15Developing grain, bracts removed (15 DPA)1.484751.406481.571652.86448



CDS Structure of MLOC_13299






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13299.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13299.7CUST_9060_PI427708080AvailableAvailablecontig_1565313 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g05690.1 -2 0.0 819 409/476 (86%) 13108.m00563 protein ABC transporter, ATP-binding protein, putative
TAIR PP10 AT1G28010.1 -2 2e-114 397 219/470 (47%) | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein 14 | chr1:9763436-9767917 FORWARD LENGTH=1247