MLOC_13292 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.18990400.1498990.151643
LEAShoots from the seedlings (10 cm shoot stage)0.35198900.1948690.257106
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.8364980.26046100.597133
NODDeveloping tillers at six leaf stage, 3rd internode0.8343530.9496381.381733.56748
CAR5Developing grain, bracts removed (5 DPA)0.1667070.1035940.05451030.119615
CAR15Developing grain, bracts removed (15 DPA)1.058731.049990.9892452.8386



CDS Structure of MLOC_13292






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13292.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13292.1CUST_1991_PI427708083AvailableAvailablecontig_1565296 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46610.1 +2 9e-32 122 98/263 (37%) 13105.m04980 protein myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT5G26660.1 +3 5e-18 82 46/84 (55%) | Symbols: ATMYB86, MYB86 | myb domain protein 86 | chr5:9331775-9333044 REVERSE LENGTH=352