MLOC_13264 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07964220.1323670.2185720.130096
LEAShoots from the seedlings (10 cm shoot stage)0.2277590.2832950.09710560.159022
INF1Young developing inflorescences (5mm)0.3464040.2431560.2577920.233921
INF2Developing inflorescences (1-1.5 cm)0.4660650.4336730.3682850.452239
ROORoots from the seedlings (10 cm shoot stage)00.3151140.1172230.257196
NODDeveloping tillers at six leaf stage, 3rd internode0.01496460.07315790.06825590.20513
CAR5Developing grain, bracts removed (5 DPA)0.4502140.4018920.1848960.322445
CAR15Developing grain, bracts removed (15 DPA)0.1093060.1188180.1561390.27041



CDS Structure of MLOC_13264






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13264.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13264.1CUST_1981_PI427708083AvailableAvailablecontig_1565240 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g23770.1 -2 5e-65 238 139/357 (39%) 13112.m02415 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----