MLOC_13246 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.157414.80314.999714.7782
LEAShoots from the seedlings (10 cm shoot stage)9.759269.2059911.80339.1028
INF1Young developing inflorescences (5mm)16.401519.272719.925114.8566
INF2Developing inflorescences (1-1.5 cm)16.548417.065717.389617.6836
ROORoots from the seedlings (10 cm shoot stage)12.777213.37411.676816.1331
NODDeveloping tillers at six leaf stage, 3rd internode11.500312.5516.980644.9713
CAR5Developing grain, bracts removed (5 DPA)12.920514.408815.437312.9899
CAR15Developing grain, bracts removed (15 DPA)5.018474.638593.919059.80389



CDS Structure of MLOC_13246






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13246.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13246.1CUST_17557_PI427708080AvailableAvailablecontig_1565208 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g04820.1 +2 1e-178 511 265/299 (89%) 13106.m00446 protein leucine carboxyl methyltransferase 1, putative, expressed
TAIR PP10 AT1G02100.1 +2 9e-134 395 210/297 (71%) Leucine carboxyl methyltransferase | chr1:389876-392448 FORWARD LENGTH=332