MLOC_13243 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.058246.062625.477415.40018
LEAShoots from the seedlings (10 cm shoot stage)5.942671.513571.850862.65543
INF1Young developing inflorescences (5mm)13.385212.773411.033810.4204
INF2Developing inflorescences (1-1.5 cm)7.7321610.00527.70479.5074
ROORoots from the seedlings (10 cm shoot stage)1.445162.789671.940052.96681
NODDeveloping tillers at six leaf stage, 3rd internode2.645982.815552.165048.61472
CAR5Developing grain, bracts removed (5 DPA)5.573315.690935.003995.28212
CAR15Developing grain, bracts removed (15 DPA)1.806341.693932.181054.31302



CDS Structure of MLOC_13243






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13243.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13243.1CUST_9054_PI427708080AvailableAvailablecontig_1565201 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g53070.1 +3 0.0 1323 784/1004 (78%) 13101.m05559 protein ATP binding protein, putative, expressed
TAIR PP10 AT4G18820.1 +3 0.0 696 440/882 (50%) AAA-type ATPase family protein | chr4:10330371-10334090 FORWARD LENGTH=1097