- Predicted Gene MLOC_13213
MLOC_13213 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13213_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13213_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 30.9467 | 31.9302 | 33.969 | 32.3591 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 42.4036 | 18.173 | 21.3853 | 23.2859 |
INF1 | Young developing inflorescences (5mm) | 28.8959 | 23.798 | 19.8092 | 20.7911 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.7381 | 25.5748 | 28.5793 | 26.8882 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.9604 | 24.8032 | 20.3758 | 27.5785 |
NOD | Developing tillers at six leaf stage, 3rd internode | 85.7726 | 93.458 | 37.36 | 265.137 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.696 | 19.487 | 19.006 | 18.887 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.23065 | 4.46932 | 5.38803 | 11.7871 |
CDS Structure of MLOC_13213
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13213.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g61800.2 |
-1 |
0.0 |
767 |
403/476 (85%) |
13103.m06810 protein polygalacturonase, putative, expressed |
TAIR PP10 |
AT3G62110.1 |
-1 |
0.0 |
537 |
286/433 (66%) |
Pectin lyase-like superfamily protein | chr3:22997313-22999503 REVERSE LENGTH=471 |