MLOC_13209 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.720319.418519.71719.4416
LEAShoots from the seedlings (10 cm shoot stage)23.187318.693427.434317.597
INF1Young developing inflorescences (5mm)23.83724.413127.071220.1928
INF2Developing inflorescences (1-1.5 cm)35.912634.496334.20836.1171
ROORoots from the seedlings (10 cm shoot stage)40.521428.251926.230230.7046
NODDeveloping tillers at six leaf stage, 3rd internode10.935711.47415.621833.0647
CAR5Developing grain, bracts removed (5 DPA)17.144418.095518.025716.0814
CAR15Developing grain, bracts removed (15 DPA)1.968651.828682.134334.45898



CDS Structure of MLOC_13209






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13209.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366657NoneNoneNoneNone
MLOC_13209.1CUST_1275_PI427708080AvailableAvailablecontig_1565115 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65310.1 +2 0.0 521 307/368 (83%) 13101.m07052 protein DUF803 domain containing, putative, expressed
TAIR PP10 AT2G21120.1 +2 4e-119 360 205/294 (70%) Protein of unknown function (DUF803) | chr2:9052103-9054266 REVERSE LENGTH=328