- Predicted Gene MLOC_13180
MLOC_13180 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13180_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13180_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 45.7668 | 21.3986 | 26.4085 | 27.0299 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.2782 | 3.16681 | 2.34134 | 4.63266 |
INF1 | Young developing inflorescences (5mm) | 49.5497 | 73.762 | 76.1712 | 52.0576 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.2248 | 35.6892 | 32.9477 | 33.8943 |
ROO | Roots from the seedlings (10 cm shoot stage) | 34.3691 | 17.7254 | 26.373 | 23.1884 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.22834 | 0.432305 | 0.515745 | 1.46449 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.3558 | 12.9962 | 14.509 | 12.5944 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.623091 | 0.13647 | 0.182042 | 0.920982 |
CDS Structure of MLOC_13180
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13180.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g38300.1 |
+1 |
4e-29 |
107 |
55/56 (98%) |
13108.m04061 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G22880.1 |
+1 |
5e-29 |
106 |
54/56 (96%) |
| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145 |