MLOC_13146 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains147.585155.957145.341164.274
LEAShoots from the seedlings (10 cm shoot stage)289.219387.541356.445321.632
INF1Young developing inflorescences (5mm)157.641152.492146.859139.664
INF2Developing inflorescences (1-1.5 cm)128.235124.783130.607147.108
ROORoots from the seedlings (10 cm shoot stage)137.628126.319127.402172.935
NODDeveloping tillers at six leaf stage, 3rd internode228.7244.21272.573956.834
CAR5Developing grain, bracts removed (5 DPA)159.226153.008159.964163.315
CAR15Developing grain, bracts removed (15 DPA)47.103648.888646.9342115.597



CDS Structure of MLOC_13146






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13146.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365182NoneNoneNoneNone
MLOC_13146.1CUST_1266_PI427708080AvailableAvailablecontig_1564930 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06390.6 +3 0.0 711 356/365 (98%) 13111.m00643 protein actin, putative, expressed
TAIR PP10 AT5G09810.1 +3 0.0 702 351/365 (96%) | Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377