MLOC_13139 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains68.668174.825379.507469.3386
LEAShoots from the seedlings (10 cm shoot stage)36.477240.40435.587829.9415
INF1Young developing inflorescences (5mm)22.923326.211826.956319.0632
INF2Developing inflorescences (1-1.5 cm)13.775413.713215.40613.5492
ROORoots from the seedlings (10 cm shoot stage)31.926447.527752.094650.2408
NODDeveloping tillers at six leaf stage, 3rd internode40.925927.213517.384875.7947
CAR5Developing grain, bracts removed (5 DPA)26.951830.830128.529325.1452
CAR15Developing grain, bracts removed (15 DPA)10.15549.8910810.437321.5626



CDS Structure of MLOC_13139






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13139.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249275.1NoneNoneNoneNone
MLOC_13139.1CUST_1265_PI427708080AvailableAvailablecontig_1564914 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40890.2 -3 2e-124 382 183/202 (91%) 13102.m04564 protein GLTP domain containing protein, putative, expressed
TAIR PP10 AT2G33470.2 -3 2e-101 320 149/202 (74%) | Symbols: GLTP1 | glycolipid transfer protein 1 | chr2:14176599-14177950 REVERSE LENGTH=202