MLOC_13138 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains108.765113.742118.2999.4895
LEAShoots from the seedlings (10 cm shoot stage)57.719628.907529.331831.3104
INF1Young developing inflorescences (5mm)179.902162.03154.947120.143
INF2Developing inflorescences (1-1.5 cm)101.71692.7983118.295.7665
ROORoots from the seedlings (10 cm shoot stage)66.856288.1805128.54594.4831
NODDeveloping tillers at six leaf stage, 3rd internode13.2186.5105712.434923.9127
CAR5Developing grain, bracts removed (5 DPA)72.994580.127276.388163.7405
CAR15Developing grain, bracts removed (15 DPA)26.194425.719920.14948.0704



CDS Structure of MLOC_13138






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13138.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370867NoneNoneNoneNone
MLOC_13138.1CUST_1264_PI427708080AvailableAvailablecontig_1564914 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43540.1 +2 9e-68 228 128/134 (96%) 13104.m04326 protein ribosomal protein L14, putative, expressed
TAIR PP10 AT2G20450.1 +2 3e-58 200 111/134 (83%) Ribosomal protein L14 | chr2:8813923-8815071 FORWARD LENGTH=134