MLOC_1313 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_1313_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 17.0572 | 18.0503 | 17.0363 | 16.6211 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.9531 | 16.6111 | 18.7376 | 14.4785 |
INF1 | Young developing inflorescences (5mm) | 24.5525 | 24.8817 | 22.8365 | 18.7947 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.5422 | 22.7184 | 22.4006 | 22.8723 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.3428 | 17.6892 | 11.6667 | 18.2729 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.67522 | 17.7997 | 18.6517 | 55.8401 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.2968 | 23.4091 | 24.9716 | 20.8648 |
CAR15 | Developing grain, bracts removed (15 DPA) | 14.337 | 13.7465 | 14.1373 | 29.1271 |
CDS Structure of MLOC_1313
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1313.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
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Rice PP6 |
LOC_Os03g27820.1 |
-2 |
0.0 |
677 |
428/638 (67%) |
13103.m03253 protein expressed protein |
TAIR PP10 |
AT3G50370.1 |
-2 |
3e-48 |
185 |
170/452 (38%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 27734 Blast hits to 16708 proteins in 1259 species: Archae - 81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants - 987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI BLink). | chr3:18676436-18683863 REVERSE LENGTH=2156 |