- Predicted Gene MLOC_13125
MLOC_13125 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13125_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.63706 | 12.1936 | 10.8811 | 10.0355 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.26532 | 5.94826 | 6.343 | 5.8945 |
INF1 | Young developing inflorescences (5mm) | 25.2985 | 23.5472 | 22.3036 | 17.6415 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.5072 | 22.1095 | 20.5807 | 21.0435 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.07523 | 10.1753 | 8.80205 | 9.94974 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.28019 | 2.15219 | 4.96491 | 8.45766 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.7513 | 10.3931 | 11.0756 | 9.39064 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.06512 | 5.39345 | 4.49589 | 11.8872 |
CDS Structure of MLOC_13125
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13125.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g07290.2 |
-2 |
0.0 |
994 |
582/806 (72%) |
13108.m00747 protein HEAT repeat family protein, putative, expressed |
TAIR PP10 |
AT3G55160.1 |
-2 |
3e-131 |
438 |
322/805 (40%) |
unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr3:20445629-20452400 REVERSE LENGTH=2130 |