MLOC_13124 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.158873.530722.699833.18058
LEAShoots from the seedlings (10 cm shoot stage)6.156334.195744.979384.42101
INF1Young developing inflorescences (5mm)2.848082.711882.408112.44663
INF2Developing inflorescences (1-1.5 cm)2.198222.832652.714263.0463
ROORoots from the seedlings (10 cm shoot stage)10.138912.48788.692514.5275
NODDeveloping tillers at six leaf stage, 3rd internode2.590344.45556.9472815.3491
CAR5Developing grain, bracts removed (5 DPA)3.615233.829932.80993.64981
CAR15Developing grain, bracts removed (15 DPA)0.69430.516330.7606171.60341



CDS Structure of MLOC_13124






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13124.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13124.4CUST_9033_PI427708080AvailableAvailablecontig_1564867 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04600.1 +3 3e-173 523 320/520 (62%) 13103.m00476 protein expressed protein
TAIR PP10 AT2G33360.2 +3 4e-24 107 95/281 (34%) Protein of unknown function (DUF3527) | chr2:14140901-14142870 FORWARD LENGTH=448