MLOC_13115 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3781610.7512121.099110.778876
LEAShoots from the seedlings (10 cm shoot stage)9.2989313.623714.771511.4131
INF1Young developing inflorescences (5mm)1.156171.120260.6546550.874385
INF2Developing inflorescences (1-1.5 cm)0.9543590.7437030.8192390.935133
ROORoots from the seedlings (10 cm shoot stage)0.6347990.4655520.8472850.694128
NODDeveloping tillers at six leaf stage, 3rd internode4.6176.162416.1057422.417
CAR5Developing grain, bracts removed (5 DPA)1.319961.63041.38621.46935
CAR15Developing grain, bracts removed (15 DPA)0.5590350.7862690.705881.53954



CDS Structure of MLOC_13115






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13115.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13115.2CUST_9032_PI427708080AvailableAvailablecontig_1564836 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53460.2 +2 1e-109 340 214/420 (51%) 13104.m05501 protein AT hook motif family protein, expressed
TAIR PP10None-----