MLOC_13102 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1277390.03680550.05154620.0585875
LEAShoots from the seedlings (10 cm shoot stage)0.06083230.20756200.115338
INF1Young developing inflorescences (5mm)0.06289150.1046310.03879630.0546945
INF2Developing inflorescences (1-1.5 cm)0.09197740.02941120.03826290.0554004
ROORoots from the seedlings (10 cm shoot stage)0.1490660.1319650.3243190.162849
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)4.294366.43946.172714.55032
CAR15Developing grain, bracts removed (15 DPA)593.986609.709544.3961268.3



CDS Structure of MLOC_13102






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13102.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13102.1CUST_9029_PI427708080AvailableAvailablecontig_1564802 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g30370.1 +3 3e-92 285 136/171 (80%) 13106.m03134 protein osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
TAIR PP10 AT1G18100.1 +3 7e-70 226 106/171 (62%) | Symbols: E12A11, MFT | PEBP (phosphatidylethanolamine-binding protein) family protein | chr1:6228049-6230110 REVERSE LENGTH=173