MLOC_13092 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2541080.37747700.206006
LEAShoots from the seedlings (10 cm shoot stage)0.13921700.2316710.0966497
INF1Young developing inflorescences (5mm)0.07690880.456180.5632210.216827
INF2Developing inflorescences (1-1.5 cm)0.8373670.715250.6464020.692245
ROORoots from the seedlings (10 cm shoot stage)0.14442200.5153170.0755538
NODDeveloping tillers at six leaf stage, 3rd internode00.1635280.3148580.498515
CAR5Developing grain, bracts removed (5 DPA)0.3701830.06678450.2459730.179814
CAR15Developing grain, bracts removed (15 DPA)0.4006210.08251330.1188630.476159



CDS Structure of MLOC_13092






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13092.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13092.3NoneAvailableAvailablecontig_1564785 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g07460.1 +2 3e-19 87 40/55 (73%) 13109.m00594 protein kelch repeat protein, putative, expressed
TAIR PP10 AT3G07720.1 +2 2e-15 76 34/62 (55%) Galactose oxidase/kelch repeat superfamily protein | chr3:2465439-2467033 FORWARD LENGTH=329