MLOC_13076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.1568511.399910.619610.3489
LEAShoots from the seedlings (10 cm shoot stage)9.048880.7915471.54213.26116
INF1Young developing inflorescences (5mm)43.559543.890336.489935.4232
INF2Developing inflorescences (1-1.5 cm)42.059354.036343.905151.9826
ROORoots from the seedlings (10 cm shoot stage)5.609989.097297.218269.59668
NODDeveloping tillers at six leaf stage, 3rd internode1.073761.587090.4829314.39214
CAR5Developing grain, bracts removed (5 DPA)16.140316.171617.365215.9409
CAR15Developing grain, bracts removed (15 DPA)1.309220.7372211.580362.6933



CDS Structure of MLOC_13076






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13076.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375055NoneNoneNoneNone
MLOC_13076.1CUST_1260_PI427708080AvailableAvailablecontig_1564737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21730.1 -1 0.0 1474 828/939 (88%) 13103.m02611 protein receptor-like protein kinase precursor, putative, expressed
TAIR PP10 AT3G56370.1 -1 0.0 959 567/938 (60%) Leucine-rich repeat protein kinase family protein | chr3:20899403-20902390 REVERSE LENGTH=964