MLOC_13072 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.194432.383782.008061.88679
LEAShoots from the seedlings (10 cm shoot stage)1.83990.4929830.9717430.851386
INF1Young developing inflorescences (5mm)5.732014.137844.025243.47933
INF2Developing inflorescences (1-1.5 cm)5.478885.264265.796865.21161
ROORoots from the seedlings (10 cm shoot stage)1.278031.683211.17141.43838
NODDeveloping tillers at six leaf stage, 3rd internode0.1019840.2095180.9762190.899495
CAR5Developing grain, bracts removed (5 DPA)5.580965.388925.473984.49892
CAR15Developing grain, bracts removed (15 DPA)0.960021.34011.18622.33441



CDS Structure of MLOC_13072






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13072.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13072.2CUST_9026_PI427708080AvailableAvailablecontig_1564733 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g02760.1 -3 3e-133 406 260/513 (51%) 13107.m00204 protein OsFBD13 - F-box and FBD domain containing protein, expressed
TAIR PP10None-----