MLOC_1303 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1874010.3248680.7046720.336433
LEAShoots from the seedlings (10 cm shoot stage)0.8311861.188641.333260.86181
INF1Young developing inflorescences (5mm)0.7047930.9076670.718310.632758
INF2Developing inflorescences (1-1.5 cm)2.024790.9231151.999851.65857
ROORoots from the seedlings (10 cm shoot stage)00.3355200.957616
NODDeveloping tillers at six leaf stage, 3rd internode0.3652761.396260.9388223.73295
CAR5Developing grain, bracts removed (5 DPA)1.472010.9504941.409661.18089
CAR15Developing grain, bracts removed (15 DPA)1.089270.8725450.6010332.1281



CDS Structure of MLOC_1303






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1303.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1303.1NoneAvailableAvailablecontig_111438 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01460.1 +2 4e-62 202 97/137 (71%) 13102.m00066 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----