MLOC_13019 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.277688.12358.53339.01543
LEAShoots from the seedlings (10 cm shoot stage)1.978740.850860.4946220.947768
INF1Young developing inflorescences (5mm)0.6793941.246660.8243670.962588
INF2Developing inflorescences (1-1.5 cm)0.5397050.2872820.4206710.511928
ROORoots from the seedlings (10 cm shoot stage)7.645386.028984.964417.6148
NODDeveloping tillers at six leaf stage, 3rd internode3.41191.634960.8510494.33748
CAR5Developing grain, bracts removed (5 DPA)2.271562.675992.471632.86717
CAR15Developing grain, bracts removed (15 DPA)14.479812.48511.837935.9337



CDS Structure of MLOC_13019






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13019.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13019.2CUST_9014_PI427708080AvailableAvailablecontig_1564627 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42850.1 -1 4e-90 281 170/284 (60%) 13102.m04752 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G52260.1 -1 1e-36 137 60/72 (83%) | Symbols: AtMYB19, MYB19 | myb domain protein 19 | chr5:21220165-21221223 FORWARD LENGTH=268