- Predicted Gene MLOC_12952
MLOC_12952 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.111896 | 0.133151 | 0.136858 | 0.113476 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.467362 | 0.857872 | 0.802257 | 0.505884 |
| INF1 | Young developing inflorescences (5mm) | 0.086155 | 0.119495 | 0.15354 | 0.0843859 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0855968 | 0.0715483 | 0.0851495 | 0.0783666 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.60858 | 0.359923 | 0.559103 | 0.427872 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.1452 | 3.04418 | 8.05659 | 10.8092 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0683271 | 0.0625216 | 0.0725352 | 0.0560089 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0135119 | 0.0178744 | 0.0449237 |
CDS Structure of MLOC_12952
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12952.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g05730.1 |
-2 |
2e-75 |
214 |
102/182 (56%) |
13112.m00580 protein bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed |
| TAIR PP10 |
AT3G52720.1 |
-2 |
2e-40 |
140 |
73/178 (41%) |
| Symbols: CAH1, ATACA1, ACA1 | alpha carbonic anhydrase 1 | chr3:19538804-19541116 REVERSE LENGTH=284 |