- Predicted Gene MLOC_12926
MLOC_12926 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12926_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12926_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 25.7548 | 18.4206 | 19.2133 | 23.5983 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.0498 | 9.45179 | 10.3385 | 10.4413 |
INF1 | Young developing inflorescences (5mm) | 30.1309 | 35.9558 | 40.0747 | 34.5929 |
INF2 | Developing inflorescences (1-1.5 cm) | 40.7594 | 38.4256 | 42.4986 | 51.6003 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.3098 | 20.4869 | 21.0176 | 30.045 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.75099 | 13.9571 | 15.9282 | 52.3329 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.9607 | 25.3192 | 23.3125 | 28.8482 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.9797 | 11.4024 | 12.8119 | 31.9631 |
CDS Structure of MLOC_12926
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12926.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g29650.1 |
+3 |
2e-39 |
146 |
79/98 (81%) |
13108.m03063 protein RNA recognition motif containing protein, expressed |
TAIR PP10 |
AT4G35785.2 |
+3 |
1e-26 |
108 |
60/98 (61%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:16953211-16955127 REVERSE LENGTH=239 |