- Predicted Gene MLOC_12906
MLOC_12906 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12906_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12906_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 52.7678 | 41.5065 | 46.0028 | 46.7694 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 47.2542 | 17.7467 | 18.9189 | 22.7996 |
INF1 | Young developing inflorescences (5mm) | 53.3626 | 64.8009 | 72.3517 | 59.4405 |
INF2 | Developing inflorescences (1-1.5 cm) | 63.369 | 85.1319 | 86.3601 | 91.1809 |
ROO | Roots from the seedlings (10 cm shoot stage) | 48.9194 | 65.2357 | 54.7925 | 71.2848 |
NOD | Developing tillers at six leaf stage, 3rd internode | 60.7876 | 84.6341 | 0.686006 | 188.397 |
CAR5 | Developing grain, bracts removed (5 DPA) | 163.44 | 192.828 | 193.792 | 192.583 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.7136 | 14.2481 | 16.1041 | 39.2434 |
CDS Structure of MLOC_12906
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12906.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g40730.1 |
+1 |
2e-170 |
489 |
230/261 (88%) |
13110.m03776 protein expansin precursor, putative, expressed |
TAIR PP10 |
AT1G65680.1 |
+1 |
1e-61 |
207 |
108/242 (45%) |
| Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273 |