MLOC_12904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.515431.912981.451791.46632
LEAShoots from the seedlings (10 cm shoot stage)2.611462.209171.087041.54519
INF1Young developing inflorescences (5mm)7.331795.679157.870194.91166
INF2Developing inflorescences (1-1.5 cm)8.59258.717557.912217.72855
ROORoots from the seedlings (10 cm shoot stage)1.608062.942442.322642.69866
NODDeveloping tillers at six leaf stage, 3rd internode0.1337240.4950010.6398931.51045
CAR5Developing grain, bracts removed (5 DPA)2.602553.315483.479122.41624
CAR15Developing grain, bracts removed (15 DPA)1.203280.864371.329942.06004



CDS Structure of MLOC_12904






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12904.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12904.1CUST_1937_PI427708083AvailableAvailablecontig_1564340 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g29950.3 -3 2e-117 362 170/199 (85%) 13109.m02980 protein OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed
TAIR PP10 AT1G69020.1 -3 1e-72 250 114/195 (58%) Prolyl oligopeptidase family protein | chr1:25943949-25947197 REVERSE LENGTH=757