- Predicted Gene MLOC_12904
MLOC_12904 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.51543 | 1.91298 | 1.45179 | 1.46632 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.61146 | 2.20917 | 1.08704 | 1.54519 |
INF1 | Young developing inflorescences (5mm) | 7.33179 | 5.67915 | 7.87019 | 4.91166 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.5925 | 8.71755 | 7.91221 | 7.72855 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.60806 | 2.94244 | 2.32264 | 2.69866 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.133724 | 0.495001 | 0.639893 | 1.51045 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.60255 | 3.31548 | 3.47912 | 2.41624 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.20328 | 0.86437 | 1.32994 | 2.06004 |
CDS Structure of MLOC_12904
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12904.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g29950.3 |
-3 |
2e-117 |
362 |
170/199 (85%) |
13109.m02980 protein OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed |
TAIR PP10 |
AT1G69020.1 |
-3 |
1e-72 |
250 |
114/195 (58%) |
Prolyl oligopeptidase family protein | chr1:25943949-25947197 REVERSE LENGTH=757 |