MLOC_1289 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.880222 | 0.788565 | 0.269208 | 0.986854 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.32199 | 0 | 0.988313 | 0.860274 |
INF1 | Young developing inflorescences (5mm) | 2.39549 | 3.34922 | 3.79721 | 4.04545 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.44237 | 2.62319 | 1.61568 | 3.67916 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 1.46138 | 1.06708 | 4.38328 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.129678 | 0 | 0 | 0.0125459 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.70947 | 2.47375 | 1.63628 | 3.08381 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.267529 | 0.453226 | 0.200107 | 1.21157 |
CDS Structure of MLOC_1289
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1289.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g48410.1 |
-1 |
6e-34 |
119 |
56/63 (89%) |
13105.m05148 protein 50S ribosomal protein L21, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT4G30930.1 |
-1 |
3e-23 |
91 |
41/54 (76%) |
| Symbols: NFD1 | Ribosomal protein L21 | chr4:15050170-15051630 REVERSE LENGTH=270 |