MLOC_12844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04619340.1051690.02684160.0608364
LEAShoots from the seedlings (10 cm shoot stage)1.080840.9310411.223240.761833
INF1Young developing inflorescences (5mm)0.05795950.1091910.1835990.0731841
INF2Developing inflorescences (1-1.5 cm)0.0412460.05321720.0399720.0409092
ROORoots from the seedlings (10 cm shoot stage)0.5803050.4607810.2511440.488631
NODDeveloping tillers at six leaf stage, 3rd internode0.546180.4345170.3624881.10683
CAR5Developing grain, bracts removed (5 DPA)0.1639020.1165190.2390350.129113
CAR15Developing grain, bracts removed (15 DPA)0.2932720.331390.2916270.559772



CDS Structure of MLOC_12844






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12844.1CUST_8991_PI427708080AvailableAvailablecontig_1564232 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52640.1 -3 0.0 724 333/391 (85%) 13102.m06001 protein xyloglucan fucosyltransferase, putative, expressed
TAIR PP10 AT2G03220.1 -3 0.0 602 290/464 (63%) | Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase 1 | chr2:970401-972353 REVERSE LENGTH=558