- Predicted Gene MLOC_12841
MLOC_12841 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12841_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12841_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.30345 | 1.38036 | 1.00439 | 1.09385 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.52968 | 1.19373 | 0.3113 | 1.11692 |
INF1 | Young developing inflorescences (5mm) | 4.58898 | 5.01198 | 7.15431 | 3.65573 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.08633 | 6.4758 | 6.2812 | 5.72679 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.128296 | 0.928388 | 0.262957 | 0.714583 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.353629 | 0.425493 | 0.485411 | 1.27077 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.21947 | 0.77797 | 1.45533 | 0.895608 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.411169 | 0.250862 | 0.241434 | 0.666303 |
CDS Structure of MLOC_12841
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12841.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g41490.1 |
-3 |
4e-102 |
329 |
188/223 (84%) |
13104.m04071 protein DNA-directed RNA polymerase III subunit RPC1, putative, expressed |
TAIR PP10 |
AT5G60040.1 |
-3 |
4e-49 |
178 |
120/220 (55%) |
| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1376 |