MLOC_12831 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.970823.519024.179743.29776
LEAShoots from the seedlings (10 cm shoot stage)4.5335715.11438.31566.66178
INF1Young developing inflorescences (5mm)2.911644.813175.552462.98574
INF2Developing inflorescences (1-1.5 cm)3.957223.266153.374073.37481
ROORoots from the seedlings (10 cm shoot stage)5.17177.023476.295336.94542
NODDeveloping tillers at six leaf stage, 3rd internode0.6749611.287312.93834.3905
CAR5Developing grain, bracts removed (5 DPA)1.097311.785561.367271.21289
CAR15Developing grain, bracts removed (15 DPA)0.7610570.3250140.9219821.26134



CDS Structure of MLOC_12831






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12831.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12831.2NoneAvailableAvailablecontig_1564210 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16260.2 -1 3e-67 229 113/151 (75%) 13101.m01814 protein major facilitator superfamily antiporter, putative, expressed
TAIR PP10 AT3G43790.1 -1 9e-40 152 67/146 (46%) | Symbols: ZIFL2 | zinc induced facilitator-like 2 | chr3:15655443-15658848 FORWARD LENGTH=478