- Predicted Gene MLOC_12827
MLOC_12827 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.7881 | 16.0276 | 15.5441 | 18.2327 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.33986 | 1.78313 | 1.30284 | 2.85366 |
| INF1 | Young developing inflorescences (5mm) | 47.9112 | 45.6195 | 46.4598 | 43.7514 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.9761 | 43.3823 | 37.4874 | 47.7348 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.97969 | 9.09767 | 11.1421 | 12.5427 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.045769 | 0.0962259 | 0.265799 | 0.477589 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.9858 | 13.3317 | 12.4819 | 14.6117 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.827552 | 0.157916 | 1.38958 | 1.82674 |
CDS Structure of MLOC_12827
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12827.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g10020.1 |
+3 |
4e-171 |
493 |
285/369 (77%) |
13102.m01106 protein Mad3/BUB1 homology region 1 domain containing protein, expressed |
| TAIR PP10 |
AT2G33560.1 |
+3 |
1e-101 |
314 |
174/325 (54%) |
| Symbols: BUBR1 | BUB1-related (BUB1: budding uninhibited by benzymidazol 1) | chr2:14213810-14215918 REVERSE LENGTH=395 |