MLOC_12820 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.430312.053513.752710.1872
LEAShoots from the seedlings (10 cm shoot stage)11.10327.280377.479196.58592
INF1Young developing inflorescences (5mm)9.5734210.100610.65296.53539
INF2Developing inflorescences (1-1.5 cm)7.738189.283968.541387.6881
ROORoots from the seedlings (10 cm shoot stage)4.328977.611635.960576.71901
NODDeveloping tillers at six leaf stage, 3rd internode18.858715.7498.6087241.0362
CAR5Developing grain, bracts removed (5 DPA)10.935810.983812.03168.81649
CAR15Developing grain, bracts removed (15 DPA)5.106554.858784.822268.86902



CDS Structure of MLOC_12820






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367045
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367045CUST_21394_PI427708080NoneNoneNone
MLOC_11396.1NoneAvailableNonecontig_1560988 (Mapped)
MLOC_12820.1NoneAvailableAvailablecontig_1564170 (Mapped)
MLOC_35905.1NoneAvailableNonecontig_2525601 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----