MLOC_12817 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.2716339.838431.92040
LEAShoots from the seedlings (10 cm shoot stage)26.511117.823113.64640
INF1Young developing inflorescences (5mm)173.666143.335137.070
INF2Developing inflorescences (1-1.5 cm)125.822133.687121.7770
ROORoots from the seedlings (10 cm shoot stage)7.2026733.778724.61980
NODDeveloping tillers at six leaf stage, 3rd internode0.5374740.6946333.013710
CAR5Developing grain, bracts removed (5 DPA)37.186233.187831.33540
CAR15Developing grain, bracts removed (15 DPA)16.26139.6572313.83330



CDS Structure of MLOC_12817






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375542
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375542CUST_22860_PI427708080NoneNoneNone
MLOC_12817.1NoneAvailableNonecontig_1564168 (Mapped)
MLOC_15664.1NoneAvailableAvailablecontig_1571247 (Mapped)
MLOC_37914.1NoneAvailableNonecontig_2549344 (Mapped)
MLOC_37915.1NoneAvailableNonecontig_2549344 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----