- Predicted Gene MLOC_12809
MLOC_12809 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12809_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12809_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.80507 | 6.7985 | 7.07208 | 6.46681 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.96092 | 1.03669 | 1.86533 | 2.03813 |
INF1 | Young developing inflorescences (5mm) | 4.72784 | 4.30396 | 3.49367 | 3.60948 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.49441 | 3.2992 | 3.75059 | 3.4626 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.28184 | 2.26315 | 5.663 | 2.69947 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.0423 | 9.46075 | 6.10469 | 21.6074 |
CAR5 | Developing grain, bracts removed (5 DPA) | 20.3856 | 22.8381 | 18.3789 | 19.9643 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.0239371 | 0.0452675 |
CDS Structure of MLOC_12809
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12809.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g10850.1 |
+2 |
1e-165 |
484 |
246/304 (81%) |
13101.m01171 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT5G05340.1 |
+2 |
2e-104 |
325 |
171/306 (56%) |
Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324 |