- Predicted Gene MLOC_12766
MLOC_12766 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.92851 | 4.58432 | 5.62543 | 4.61177 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.1805 | 7.87666 | 8.21251 | 5.95533 |
INF1 | Young developing inflorescences (5mm) | 6.1437 | 6.50717 | 7.8181 | 5.02681 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.25267 | 6.77684 | 6.43115 | 6.55601 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.50347 | 5.1737 | 6.09346 | 5.90492 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.83276 | 5.59172 | 6.80259 | 18.8078 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.13576 | 6.53963 | 7.21258 | 5.86436 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.38258 | 2.6703 | 3.64925 | 6.50675 |
CDS Structure of MLOC_12766
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12766.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53780.2 |
-1 |
2e-93 |
286 |
159/193 (82%) |
13102.m06152 protein expressed protein |
TAIR PP10 |
AT2G06005.1 |
-1 |
2e-70 |
226 |
123/179 (69%) |
| Symbols: FIP1 | FRIGIDA interacting protein 1 | chr2:2332583-2336022 FORWARD LENGTH=355 |