MLOC_12766 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.928514.584325.625434.61177
LEAShoots from the seedlings (10 cm shoot stage)6.18057.876668.212515.95533
INF1Young developing inflorescences (5mm)6.14376.507177.81815.02681
INF2Developing inflorescences (1-1.5 cm)6.252676.776846.431156.55601
ROORoots from the seedlings (10 cm shoot stage)4.503475.17376.093465.90492
NODDeveloping tillers at six leaf stage, 3rd internode4.832765.591726.8025918.8078
CAR5Developing grain, bracts removed (5 DPA)6.135766.539637.212585.86436
CAR15Developing grain, bracts removed (15 DPA)3.382582.67033.649256.50675



CDS Structure of MLOC_12766






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12766.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_12766.3CUST_1923_PI427708083AvailableAvailablecontig_1564053 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53780.2 -1 2e-93 286 159/193 (82%) 13102.m06152 protein expressed protein
TAIR PP10 AT2G06005.1 -1 2e-70 226 123/179 (69%) | Symbols: FIP1 | FRIGIDA interacting protein 1 | chr2:2332583-2336022 FORWARD LENGTH=355