MLOC_12765 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains77.194768.438268.318776.4832
LEAShoots from the seedlings (10 cm shoot stage)38.729835.309540.18233.6425
INF1Young developing inflorescences (5mm)27.201434.578632.724528.4193
INF2Developing inflorescences (1-1.5 cm)22.263227.677222.837429.0804
ROORoots from the seedlings (10 cm shoot stage)70.606967.473852.601286.5973
NODDeveloping tillers at six leaf stage, 3rd internode43.208543.703927.5798144.425
CAR5Developing grain, bracts removed (5 DPA)53.062952.511250.772455.3649
CAR15Developing grain, bracts removed (15 DPA)9.1624810.44088.7100123.772



CDS Structure of MLOC_12765






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12765.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364476NoneNoneNoneNone
MLOC_12765.1CUST_1213_PI427708080AvailableAvailablecontig_1564051 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43410.1 +2 0.0 902 466/520 (90%) 13101.m04485 protein CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G23650.1 +2 0.0 784 372/466 (80%) | Symbols: CDPK6, CPK3 | calcium-dependent protein kinase 6 | chr4:12324967-12327415 REVERSE LENGTH=529