- Predicted Gene MLOC_12765
MLOC_12765 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 77.1947 | 68.4382 | 68.3187 | 76.4832 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 38.7298 | 35.3095 | 40.182 | 33.6425 |
INF1 | Young developing inflorescences (5mm) | 27.2014 | 34.5786 | 32.7245 | 28.4193 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.2632 | 27.6772 | 22.8374 | 29.0804 |
ROO | Roots from the seedlings (10 cm shoot stage) | 70.6069 | 67.4738 | 52.6012 | 86.5973 |
NOD | Developing tillers at six leaf stage, 3rd internode | 43.2085 | 43.7039 | 27.5798 | 144.425 |
CAR5 | Developing grain, bracts removed (5 DPA) | 53.0629 | 52.5112 | 50.7724 | 55.3649 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.16248 | 10.4408 | 8.71001 | 23.772 |
CDS Structure of MLOC_12765
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12765.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g43410.1 |
+2 |
0.0 |
902 |
466/520 (90%) |
13101.m04485 protein CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT4G23650.1 |
+2 |
0.0 |
784 |
372/466 (80%) |
| Symbols: CDPK6, CPK3 | calcium-dependent protein kinase 6 | chr4:12324967-12327415 REVERSE LENGTH=529 |