MLOC_12760 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains96.696979.868389.105676.9385
LEAShoots from the seedlings (10 cm shoot stage)42.834624.308823.892923.2275
INF1Young developing inflorescences (5mm)49.557856.530757.913540.7584
INF2Developing inflorescences (1-1.5 cm)58.288545.328361.949153.1057
ROORoots from the seedlings (10 cm shoot stage)72.851758.029964.329259.321
NODDeveloping tillers at six leaf stage, 3rd internode70.376235.628933.474188.4494
CAR5Developing grain, bracts removed (5 DPA)78.854475.277285.866768.2523
CAR15Developing grain, bracts removed (15 DPA)19.893717.723819.80340.1971



CDS Structure of MLOC_12760






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12760.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362256NoneNoneNoneNone
MLOC_12760.1CUST_1212_PI427708080AvailableAvailablecontig_1564041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g62620.4 -1 7e-164 498 233/281 (83%) 13103.m06920 protein late embryogenesis abundant protein, putative, expressed
TAIR PP10 AT2G44060.2 -1 3e-132 414 192/281 (68%) Late embryogenesis abundant protein, group 2 | chr2:18226922-18227988 FORWARD LENGTH=325