MLOC_12749 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.389624.450928.05050
LEAShoots from the seedlings (10 cm shoot stage)36.868821.242523.07690
INF1Young developing inflorescences (5mm)20.678118.687923.09110
INF2Developing inflorescences (1-1.5 cm)17.294617.430222.07630
ROORoots from the seedlings (10 cm shoot stage)29.457413.547826.95730
NODDeveloping tillers at six leaf stage, 3rd internode32.53824.024423.61430
CAR5Developing grain, bracts removed (5 DPA)23.975227.112132.53110
CAR15Developing grain, bracts removed (15 DPA)7.214173.548568.41760



CDS Structure of MLOC_12749






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369347
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369347CUST_25324_PI427708080NoneNoneNone
MLOC_12749.1NoneAvailableNonecontig_1564035 (Mapped)
MLOC_30001.1NoneAvailableNonecontig_20559 (Not mapped)
MLOC_41258.1NoneAvailableNonecontig_2579893 (Not mapped)
MLOC_47212.1NoneAvailableNonecontig_30239 (Mapped)
MLOC_73895.1NoneAvailableAvailablecontig_64687 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----