MLOC_1273 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 194.939 | 156.887 | 141.524 | 176.717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 81.5263 | 59.217 | 62.2296 | 60.1333 |
| INF1 | Young developing inflorescences (5mm) | 246.867 | 256.214 | 256.759 | 232.528 |
| INF2 | Developing inflorescences (1-1.5 cm) | 155.665 | 168.505 | 171.498 | 196.267 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 96.7573 | 133.158 | 162.526 | 173.653 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.7397 | 11.54 | 22.2491 | 47.3951 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 82.2573 | 95.9284 | 83.1499 | 93.3573 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 38.7492 | 39.8713 | 30.9981 | 93.2905 |
CDS Structure of MLOC_1273
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1273.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g33997.1 |
+3 |
2e-49 |
160 |
84/86 (98%) |
13107.m03461 protein 60S ribosomal protein L44, putative, expressed |
| TAIR PP10 |
AT4G14320.1 |
+3 |
5e-49 |
158 |
82/86 (95%) |
Zinc-binding ribosomal protein family protein | chr4:8242684-8243805 REVERSE LENGTH=105 |
