- Predicted Gene MLOC_12729
MLOC_12729 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 21.233 | 32.2441 | 34.2477 | 28.176 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.5109 | 20.3233 | 12.4882 | 16.8322 |
INF1 | Young developing inflorescences (5mm) | 31.2365 | 30.4597 | 27.9536 | 23.6654 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.4194 | 25.4866 | 27.2853 | 27.2795 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.23668 | 17.4356 | 18.5127 | 19.0198 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4771 | 11.9353 | 10.2344 | 40.0742 |
CAR5 | Developing grain, bracts removed (5 DPA) | 55.61 | 54.921 | 56.2146 | 49.4472 |
CAR15 | Developing grain, bracts removed (15 DPA) | 31.3385 | 28.8104 | 38.2389 | 65.5722 |
CDS Structure of MLOC_12729
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12729.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g33420.1 |
-2 |
0.0 |
1030 |
494/650 (76%) |
13101.m03369 protein glycosyl hydrolase family protein 27, putative, expressed |
TAIR PP10 |
AT3G26380.1 |
-2 |
0.0 |
704 |
337/622 (54%) |
Melibiase family protein | chr3:9660140-9663145 FORWARD LENGTH=647 |