- Predicted Gene MLOC_12718
MLOC_12718 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12718_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12718_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.0454 | 14.3092 | 11.0803 | 12.8977 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.01538 | 2.49819 | 2.17699 | 3.0535 |
INF1 | Young developing inflorescences (5mm) | 43.7839 | 49.1924 | 47.1371 | 39.0046 |
INF2 | Developing inflorescences (1-1.5 cm) | 36.2681 | 44.0885 | 34.0431 | 42.1844 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.18556 | 10.8175 | 10.3947 | 12.2481 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.654027 | 1.31986 | 4.72792 | 5.85845 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.0573 | 15.3981 | 16.1026 | 14.7998 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.56553 | 2.05283 | 2.47683 | 5.35243 |
CDS Structure of MLOC_12718
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12718.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g17950.1 |
-2 |
0.0 |
850 |
563/650 (87%) |
13103.m02147 protein expressed protein |
TAIR PP10 |
AT1G07970.1 |
-2 |
6e-163 |
494 |
310/573 (54%) |
CONTAINS InterPro DOMAIN/s: Cytochrome B561-related, N-terminal (InterPro:IPR019176); Has 215 Blast hits to 213 proteins in 79 species: Archae - 0; Bacteria - 6; Metazoa - 131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr1:2469528-2472518 REVERSE LENGTH=693 |