MLOC_12701 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.974793.046112.672253.00901
LEAShoots from the seedlings (10 cm shoot stage)1.465150.3961680.8924010.748429
INF1Young developing inflorescences (5mm)2.789812.911862.673652.30007
INF2Developing inflorescences (1-1.5 cm)2.425552.905972.312592.76802
ROORoots from the seedlings (10 cm shoot stage)2.588023.916422.951453.80972
NODDeveloping tillers at six leaf stage, 3rd internode1.469871.460572.059674.65088
CAR5Developing grain, bracts removed (5 DPA)2.218133.488273.344812.83484
CAR15Developing grain, bracts removed (15 DPA)0.3064050.4133350.3565870.832196



CDS Structure of MLOC_12701






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_12701.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374693NoneNoneNoneNone
MLOC_12701.2CUST_1203_PI427708080AvailableAvailablecontig_1563891 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42130.1 +2 0.0 723 394/504 (78%) 13104.m04148 protein integral membrane transporter family protein, putative, expressed
TAIR PP10 AT5G25050.1 +2 4e-159 475 259/473 (55%) Major facilitator superfamily protein | chr5:8632022-8633828 FORWARD LENGTH=499