- Predicted Gene MLOC_12686
MLOC_12686 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_12686_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_12686_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.6238 | 14.3131 | 17.2099 | 15.8478 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.62779 | 1.029 | 1.7377 | 1.71043 |
INF1 | Young developing inflorescences (5mm) | 13.2226 | 17.8112 | 17.8344 | 15.1291 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.0524 | 17.7769 | 15.4897 | 18.8782 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.5513 | 12.2286 | 14.6297 | 14.3231 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.4186 | 16.4542 | 12.5764 | 40.994 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.633592 | 1.31708 | 1.2747 | 1.16263 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.524995 | 0.222492 | 0.539453 | 1.0633 |
CDS Structure of MLOC_12686
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12686.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g12610.1 |
+1 |
0.0 |
864 |
475/549 (87%) |
13106.m01381 protein auxin efflux carrier component, putative, expressed |
TAIR PP10 |
AT1G73590.1 |
+1 |
0.0 |
676 |
372/578 (64%) |
| Symbols: PIN1, ATPIN1 | Auxin efflux carrier family protein | chr1:27659772-27662876 FORWARD LENGTH=622 |