- Predicted Gene MLOC_12680
MLOC_12680 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.157 | 22.3037 | 22.536 | 21.2709 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.1277 | 30.6537 | 36.8875 | 26.6627 |
| INF1 | Young developing inflorescences (5mm) | 22.3293 | 24.7402 | 27.7337 | 19.8164 |
| INF2 | Developing inflorescences (1-1.5 cm) | 21.8042 | 25.3085 | 24.4449 | 24.8869 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.1378 | 24.708 | 20.9246 | 28.1988 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.3796 | 36.3475 | 53.3863 | 125.77 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.9163 | 20.6652 | 22.5678 | 18.9646 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.93428 | 6.93277 | 5.74771 | 13.4644 |
CDS Structure of MLOC_12680
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_12680.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g32730.1 |
-2 |
0.0 |
675 |
338/392 (86%) |
13110.m02864 protein haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed |
| TAIR PP10 |
AT4G21470.1 |
-2 |
2e-179 |
516 |
261/377 (69%) |
| Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FMN hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379 |
